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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G217700.2.p | ||||||||
Common Name | PRUPE_ppa025527mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 160aa MW: 17710.2 Da PI: 10.0121 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.1e-10 | 53 | 100 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L++l+P + ++ + Ka L + ++Y++ Lq Prupe.1G217700.2.p 53 SHSLAERARREKINVRMKLLQSLVPGC----DQINGKAHALDEIIKYVQLLQ 100 8*************************9....9*****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.33E-6 | 47 | 104 | No hit | No description |
SuperFamily | SSF47459 | 1.57E-15 | 47 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.151 | 49 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.3E-15 | 50 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.4E-8 | 53 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.3E-5 | 55 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MVSEEEGERK GKKQRKQNGS EAKKQSKVAA AFAERVQRNG VRVKARRGEA TDSHSLAERA 60 RREKINVRMK LLQSLVPGCD QINGKAHALD EIIKYVQLLQ NQVECLAAEL AFVDAMLYDD 120 CELNPSTNPC ASDQATRKKK ENRGKATALN LASVLCPFR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007227105.1 | 1e-114 | hypothetical protein PRUPE_ppa025527mg | ||||
Swissprot | Q93W88 | 1e-33 | BH137_ARATH; Transcription factor bHLH137 | ||||
TrEMBL | M5XQV8 | 1e-114 | M5XQV8_PRUPE; Uncharacterized protein | ||||
STRING | PGSC0003DMT400069568 | 2e-33 | (Solanum tuberosum) | ||||
STRING | GLYMA04G37690.1 | 4e-33 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 4e-33 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G217700.2.p |
Entrez Gene | 18790549 |